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Cluster: HRGMv2_0312_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0312_1 HRGMv2_0312_1_115 140061 141263 - 2.A.23.2.7
STP HRGMv2_0312_1 HRGMv2_0312_1_116 141265 142476 - Aminotran_1_2
pfam HRGMv2_0312_1 HRGMv2_0312_1_117 142476 143762 - SUFBD_core | SufBD_N | SufBD_N
TC HRGMv2_0312_1 HRGMv2_0312_1_118 143759 144514 - 3.A.1.3.10
TC HRGMv2_0312_1 HRGMv2_0312_1_119 144630 146618 - 1.B.6.1.14
pfam HRGMv2_0312_1 HRGMv2_0312_1_120 146679 147287 - ADK | AAA_17 | AAA_33
STP HRGMv2_0312_1 HRGMv2_0312_1_121 147373 147918 - Pribosyltran
CAZyme HRGMv2_0312_1 HRGMv2_0312_1_122 147928 149244 - GT30
Gene ID: HRGMv2_0312_1_115
Type: TC
Location: 140061 - 141263 (-)
Gene ID: HRGMv2_0312_1_116
Type: STP
Location: 141265 - 142476 (-)
Gene ID: HRGMv2_0312_1_117
Type: pfam
Location: 142476 - 143762 (-)
Gene ID: HRGMv2_0312_1_118
Type: TC
Location: 143759 - 144514 (-)
Gene ID: HRGMv2_0312_1_119
Type: TC
Location: 144630 - 146618 (-)
Gene ID: HRGMv2_0312_1_120
Type: pfam
Location: 146679 - 147287 (-)
Gene ID: HRGMv2_0312_1_121
Type: STP
Location: 147373 - 147918 (-)
Gene ID: HRGMv2_0312_1_122
Type: CAZyme
Location: 147928 - 149244 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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