Cluster: HRGMv2_0312_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0312
- CGC Family ID: CGCFAM_00118
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0312_3 | HRGMv2_0312_3_14 | 16485 | 18782 | - | GH3 |
| CAZyme | HRGMv2_0312_3 | HRGMv2_0312_3_15 | 18827 | 22834 | - | GH127 | GH3 |
| pfam | HRGMv2_0312_3 | HRGMv2_0312_3_16 | 22917 | 24194 | - | SusF_SusE |
| CAZyme | HRGMv2_0312_3 | HRGMv2_0312_3_17 | 24259 | 25671 | - | GH27 |
| pfam | HRGMv2_0312_3 | HRGMv2_0312_3_18 | 25689 | 27620 | - | SusF_SusE | SusF_SusE | SusF_SusE |
| TC | HRGMv2_0312_3 | HRGMv2_0312_3_19 | 27639 | 29360 | - | 8.A.46.1.1 |
| TC | HRGMv2_0312_3 | HRGMv2_0312_3_20 | 29390 | 32674 | - | 1.B.14.6.1 |
Gene ID: HRGMv2_0312_3_14
Type: CAZyme
Location: 16485 - 18782 (-)
Type: CAZyme
Location: 16485 - 18782 (-)
Gene ID: HRGMv2_0312_3_15
Type: CAZyme
Location: 18827 - 22834 (-)
Type: CAZyme
Location: 18827 - 22834 (-)
Gene ID: HRGMv2_0312_3_16
Type: pfam
Location: 22917 - 24194 (-)
Type: pfam
Location: 22917 - 24194 (-)
Gene ID: HRGMv2_0312_3_17
Type: CAZyme
Location: 24259 - 25671 (-)
Type: CAZyme
Location: 24259 - 25671 (-)
Gene ID: HRGMv2_0312_3_18
Type: pfam
Location: 25689 - 27620 (-)
Type: pfam
Location: 25689 - 27620 (-)
Gene ID: HRGMv2_0312_3_19
Type: TC
Location: 27639 - 29360 (-)
Type: TC
Location: 27639 - 29360 (-)
Gene ID: HRGMv2_0312_3_20
Type: TC
Location: 29390 - 32674 (-)
Type: TC
Location: 29390 - 32674 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp900760735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.