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Cluster: HRGMv2_0312_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0312_1 HRGMv2_0312_1_20 22239 24767 - 1.B.14.6.1
TC HRGMv2_0312_1 HRGMv2_0312_1_21 24773 25267 - 1.B.14.6.1
TC HRGMv2_0312_1 HRGMv2_0312_1_22 25588 25968 - 2.A.7.34.3
pfam HRGMv2_0312_1 HRGMv2_0312_1_23 26038 27150 - HGSNAT_cat
CAZyme HRGMv2_0312_1 HRGMv2_0312_1_24 27232 29478 + GH92
STP HRGMv2_0312_1 HRGMv2_0312_1_25 29450 30367 - PfkB
TC HRGMv2_0312_1 HRGMv2_0312_1_26 30371 31603 - 2.A.1.7.1
Gene ID: HRGMv2_0312_1_20
Type: TC
Location: 22239 - 24767 (-)
Gene ID: HRGMv2_0312_1_21
Type: TC
Location: 24773 - 25267 (-)
Gene ID: HRGMv2_0312_1_22
Type: TC
Location: 25588 - 25968 (-)
Gene ID: HRGMv2_0312_1_23
Type: pfam
Location: 26038 - 27150 (-)
Gene ID: HRGMv2_0312_1_24
Type: CAZyme
Location: 27232 - 29478 (+)
Gene ID: HRGMv2_0312_1_25
Type: STP
Location: 29450 - 30367 (-)
Gene ID: HRGMv2_0312_1_26
Type: TC
Location: 30371 - 31603 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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