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Cluster: HRGMv2_0312_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0312_7 HRGMv2_0312_7_124 151623 152519 - 3.A.1.115.1
pfam HRGMv2_0312_7 HRGMv2_0312_7_125 152844 154595 + PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
pfam HRGMv2_0312_7 HRGMv2_0312_7_126 154622 155218 + Flavin_Reduct
CAZyme HRGMv2_0312_7 HRGMv2_0312_7_127 155446 157926 + GT51
TC HRGMv2_0312_7 HRGMv2_0312_7_128 157987 160398 + 3.B.1.1.6
pfam HRGMv2_0312_7 HRGMv2_0312_7_129 160598 160852 + Ribosomal_L31
pfam HRGMv2_0312_7 HRGMv2_0312_7_130 161113 161667 + Pep_deformylase
TC HRGMv2_0312_7 HRGMv2_0312_7_131 161676 163361 + 3.A.1.120.6
TC HRGMv2_0312_7 HRGMv2_0312_7_132 163493 165184 + 2.A.81.1.2
Gene ID: HRGMv2_0312_7_124
Type: TC
Location: 151623 - 152519 (-)
Gene ID: HRGMv2_0312_7_125
Type: pfam
Location: 152844 - 154595 (+)
Gene ID: HRGMv2_0312_7_126
Type: pfam
Location: 154622 - 155218 (+)
Gene ID: HRGMv2_0312_7_127
Type: CAZyme
Location: 155446 - 157926 (+)
Gene ID: HRGMv2_0312_7_128
Type: TC
Location: 157987 - 160398 (+)
Gene ID: HRGMv2_0312_7_129
Type: pfam
Location: 160598 - 160852 (+)
Gene ID: HRGMv2_0312_7_130
Type: pfam
Location: 161113 - 161667 (+)
Gene ID: HRGMv2_0312_7_131
Type: TC
Location: 161676 - 163361 (+)
Gene ID: HRGMv2_0312_7_132
Type: TC
Location: 163493 - 165184 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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