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Cluster: HRGMv2_0312_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0312_22 HRGMv2_0312_22_12 10964 11848 + GH73
pfam HRGMv2_0312_22 HRGMv2_0312_22_13 11892 13322 - SLFN_AlbA_2 | HATPase_c_4
pfam HRGMv2_0312_22 HRGMv2_0312_22_14 13692 18128 + Cleaved_Adhesin | CARDB | DUF6383
TC HRGMv2_0312_22 HRGMv2_0312_22_15 18202 21345 - 2.A.6.2.16
TC HRGMv2_0312_22 HRGMv2_0312_22_16 21359 22534 - 2.A.6.2.4
TC HRGMv2_0312_22 HRGMv2_0312_22_17 22608 23996 - 1.B.17.3.1
CAZyme HRGMv2_0312_22 HRGMv2_0312_22_18 24064 25044 - GT2
Gene ID: HRGMv2_0312_22_12
Type: CAZyme
Location: 10964 - 11848 (+)
Gene ID: HRGMv2_0312_22_13
Type: pfam
Location: 11892 - 13322 (-)
Gene ID: HRGMv2_0312_22_14
Type: pfam
Location: 13692 - 18128 (+)
Gene ID: HRGMv2_0312_22_15
Type: TC
Location: 18202 - 21345 (-)
Gene ID: HRGMv2_0312_22_16
Type: TC
Location: 21359 - 22534 (-)
Gene ID: HRGMv2_0312_22_17
Type: TC
Location: 22608 - 23996 (-)
Gene ID: HRGMv2_0312_22_18
Type: CAZyme
Location: 24064 - 25044 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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