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Cluster: HRGMv2_0312_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0312_6 HRGMv2_0312_6_90 106085 109456 + 1.B.14.6.1
pfam HRGMv2_0312_6 HRGMv2_0312_6_91 109463 111169 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0312_6 HRGMv2_0312_6_92 111248 112762 + GH30
NULL(UNKNOWN) HRGMv2_0312_6 HRGMv2_0312_6_93 112800 115268 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0312_6 HRGMv2_0312_6_94 115355 115879 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0312_6 HRGMv2_0312_6_95 115890 118097 + GH36
CAZyme HRGMv2_0312_6 HRGMv2_0312_6_96 118104 121133 + GH97
NULL(UNKNOWN) HRGMv2_0312_6 HRGMv2_0312_6_97 121118 121762 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0312_6 HRGMv2_0312_6_98 121937 123604 - 4.C.1.1.4
Gene ID: HRGMv2_0312_6_90
Type: TC
Location: 106085 - 109456 (+)
Gene ID: HRGMv2_0312_6_91
Type: pfam
Location: 109463 - 111169 (+)
Gene ID: HRGMv2_0312_6_92
Type: CAZyme
Location: 111248 - 112762 (+)
Gene ID: HRGMv2_0312_6_93
Type:
Location: 112800 - 115268 (+)
Gene ID: HRGMv2_0312_6_94
Type:
Location: 115355 - 115879 (+)
Gene ID: HRGMv2_0312_6_95
Type: CAZyme
Location: 115890 - 118097 (+)
Gene ID: HRGMv2_0312_6_96
Type: CAZyme
Location: 118104 - 121133 (+)
Gene ID: HRGMv2_0312_6_97
Type:
Location: 121118 - 121762 (-)
Gene ID: HRGMv2_0312_6_98
Type: TC
Location: 121937 - 123604 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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