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Cluster: HRGMv2_0312_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0312_6 HRGMv2_0312_6_18 24988 25359 + 3.D.1.8.1
TC HRGMv2_0312_6 HRGMv2_0312_6_19 25350 25964 + 3.D.1.6.1
TC HRGMv2_0312_6 HRGMv2_0312_6_20 25971 27596 + 3.D.1.5.1
TC HRGMv2_0312_6 HRGMv2_0312_6_21 27636 28715 + 3.D.1.5.1
TC HRGMv2_0312_6 HRGMv2_0312_6_22 28744 30246 + 3.A.2.1.2
pfam HRGMv2_0312_6 HRGMv2_0312_6_23 30254 30490 + ATP-synt_DE_N
TC HRGMv2_0312_6 HRGMv2_0312_6_24 30527 31903 + 3.A.2.1.6
TC HRGMv2_0312_6 HRGMv2_0312_6_25 31941 32210 + 3.A.2.1.6
pfam HRGMv2_0312_6 HRGMv2_0312_6_26 32291 32785 + ATP-synt_B | Mt_ATP-synt_B
pfam HRGMv2_0312_6 HRGMv2_0312_6_27 32790 33338 + OSCP
TC HRGMv2_0312_6 HRGMv2_0312_6_28 33340 34923 + 3.A.2.1.3
TC HRGMv2_0312_6 HRGMv2_0312_6_29 34943 35818 + 3.A.2.1.1
STP HRGMv2_0312_6 HRGMv2_0312_6_30 35864 36412 + Fer4 | Fer4
pfam HRGMv2_0312_6 HRGMv2_0312_6_31 36453 36980 + Oxidored_q3
TC HRGMv2_0312_6 HRGMv2_0312_6_32 36986 37297 + 3.D.1.2.1
TC HRGMv2_0312_6 HRGMv2_0312_6_33 37300 39285 + 3.D.1.2.1
TC HRGMv2_0312_6 HRGMv2_0312_6_34 39312 40829 + 3.D.1.2.1
TC HRGMv2_0312_6 HRGMv2_0312_6_35 40857 42320 + 3.D.9.1.1
CAZyme HRGMv2_0312_6 HRGMv2_0312_6_36 42635 44587 + GH133
CAZyme HRGMv2_0312_6 HRGMv2_0312_6_37 44606 45865 + GT4
CAZyme HRGMv2_0312_6 HRGMv2_0312_6_38 45885 47339 + GH57
NULL(UNKNOWN) HRGMv2_0312_6 HRGMv2_0312_6_39 47572 47799 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0312_6 HRGMv2_0312_6_40 47848 49500 + AMP-binding | AMP-binding_C
CAZyme HRGMv2_0312_6 HRGMv2_0312_6_41 49503 51896 - GH2
TC HRGMv2_0312_6 HRGMv2_0312_6_42 52469 53872 + 9.B.126.2.1
TC HRGMv2_0312_6 HRGMv2_0312_6_43 53847 54506 - 2.A.115.2.14
Gene ID: HRGMv2_0312_6_18
Type: TC
Location: 24988 - 25359 (+)
Gene ID: HRGMv2_0312_6_19
Type: TC
Location: 25350 - 25964 (+)
Gene ID: HRGMv2_0312_6_20
Type: TC
Location: 25971 - 27596 (+)
Gene ID: HRGMv2_0312_6_21
Type: TC
Location: 27636 - 28715 (+)
Gene ID: HRGMv2_0312_6_22
Type: TC
Location: 28744 - 30246 (+)
Gene ID: HRGMv2_0312_6_23
Type: pfam
Location: 30254 - 30490 (+)
Gene ID: HRGMv2_0312_6_24
Type: TC
Location: 30527 - 31903 (+)
Gene ID: HRGMv2_0312_6_25
Type: TC
Location: 31941 - 32210 (+)
Gene ID: HRGMv2_0312_6_26
Type: pfam
Location: 32291 - 32785 (+)
Gene ID: HRGMv2_0312_6_27
Type: pfam
Location: 32790 - 33338 (+)
Gene ID: HRGMv2_0312_6_28
Type: TC
Location: 33340 - 34923 (+)
Gene ID: HRGMv2_0312_6_29
Type: TC
Location: 34943 - 35818 (+)
Gene ID: HRGMv2_0312_6_30
Type: STP
Location: 35864 - 36412 (+)
Gene ID: HRGMv2_0312_6_31
Type: pfam
Location: 36453 - 36980 (+)
Gene ID: HRGMv2_0312_6_32
Type: TC
Location: 36986 - 37297 (+)
Gene ID: HRGMv2_0312_6_33
Type: TC
Location: 37300 - 39285 (+)
Gene ID: HRGMv2_0312_6_34
Type: TC
Location: 39312 - 40829 (+)
Gene ID: HRGMv2_0312_6_35
Type: TC
Location: 40857 - 42320 (+)
Gene ID: HRGMv2_0312_6_36
Type: CAZyme
Location: 42635 - 44587 (+)
Gene ID: HRGMv2_0312_6_37
Type: CAZyme
Location: 44606 - 45865 (+)
Gene ID: HRGMv2_0312_6_38
Type: CAZyme
Location: 45885 - 47339 (+)
Gene ID: HRGMv2_0312_6_39
Type:
Location: 47572 - 47799 (-)
Gene ID: HRGMv2_0312_6_40
Type: pfam
Location: 47848 - 49500 (+)
Gene ID: HRGMv2_0312_6_41
Type: CAZyme
Location: 49503 - 51896 (-)
Gene ID: HRGMv2_0312_6_42
Type: TC
Location: 52469 - 53872 (+)
Gene ID: HRGMv2_0312_6_43
Type: TC
Location: 53847 - 54506 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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