dbCAN Logo

Cluster: HRGMv2_0312_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0312_2 HRGMv2_0312_2_202 209952 211406 - GH128
CAZyme HRGMv2_0312_2 HRGMv2_0312_2_203 211396 213648 - GH3
CAZyme HRGMv2_0312_2 HRGMv2_0312_2_204 213645 214829 - GH16_3
NULL(UNKNOWN) HRGMv2_0312_2 HRGMv2_0312_2_205 214919 215848 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0312_2 HRGMv2_0312_2_206 215965 217560 - 8.A.46.1.4
TC HRGMv2_0312_2 HRGMv2_0312_2_207 217604 220729 - 1.B.14.6.1
TF HRGMv2_0312_2 HRGMv2_0312_2_208 221102 223942 + GerE
TC HRGMv2_0312_2 HRGMv2_0312_2_209 224060 226051 - 1.B.14.10.1
Gene ID: HRGMv2_0312_2_202
Type: CAZyme
Location: 209952 - 211406 (-)
Gene ID: HRGMv2_0312_2_203
Type: CAZyme
Location: 211396 - 213648 (-)
Gene ID: HRGMv2_0312_2_204
Type: CAZyme
Location: 213645 - 214829 (-)
Gene ID: HRGMv2_0312_2_205
Type:
Location: 214919 - 215848 (-)
Gene ID: HRGMv2_0312_2_206
Type: TC
Location: 215965 - 217560 (-)
Gene ID: HRGMv2_0312_2_207
Type: TC
Location: 217604 - 220729 (-)
Gene ID: HRGMv2_0312_2_208
Type: TF
Location: 221102 - 223942 (+)
Gene ID: HRGMv2_0312_2_209
Type: TC
Location: 224060 - 226051 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List