Cluster: HRGMv2_0312_CGC35
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0312
- CGC Family ID: CGCFAM_01461
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0312_16 | HRGMv2_0312_16_37 | 48335 | 49762 | - | GH13_28 |
| TC | HRGMv2_0312_16 | HRGMv2_0312_16_38 | 49882 | 50589 | + | 3.A.25.1.1 |
| pfam | HRGMv2_0312_16 | HRGMv2_0312_16_39 | 50601 | 51362 | + | DHODB_Fe-S_bind |
| STP | HRGMv2_0312_16 | HRGMv2_0312_16_40 | 51359 | 52867 | + | Pyr_redox_2 |
| TC | HRGMv2_0312_16 | HRGMv2_0312_16_41 | 52890 | 53897 | - | 1.A.23.2.1 |
| pfam | HRGMv2_0312_16 | HRGMv2_0312_16_42 | 53969 | 55426 | - | TRAM | tRNA_U5-meth_tr | Methyltransf_31 |
| pfam | HRGMv2_0312_16 | HRGMv2_0312_16_43 | 55568 | 56266 | + | Vut_1 |
| TC | HRGMv2_0312_16 | HRGMv2_0312_16_44 | 56299 | 58191 | - | 3.A.24.1.1 |
| pfam | HRGMv2_0312_16 | HRGMv2_0312_16_45 | 58712 | 59917 | - | Phage_integrase | Phage_int_SAM_5 | Arm-DNA-bind_5 |
| TC | HRGMv2_0312_16 | HRGMv2_0312_16_46 | 60091 | 62796 | + | 3.A.3.2.17 |
| pfam | HRGMv2_0312_16 | HRGMv2_0312_16_47 | 62908 | 63669 | - | CMD |
| TC | HRGMv2_0312_16 | HRGMv2_0312_16_48 | 63828 | 64805 | - | 2.A.4.7.9 |
Gene ID: HRGMv2_0312_16_37
Type: CAZyme
Location: 48335 - 49762 (-)
Type: CAZyme
Location: 48335 - 49762 (-)
Gene ID: HRGMv2_0312_16_38
Type: TC
Location: 49882 - 50589 (+)
Type: TC
Location: 49882 - 50589 (+)
Gene ID: HRGMv2_0312_16_39
Type: pfam
Location: 50601 - 51362 (+)
Type: pfam
Location: 50601 - 51362 (+)
Gene ID: HRGMv2_0312_16_40
Type: STP
Location: 51359 - 52867 (+)
Type: STP
Location: 51359 - 52867 (+)
Gene ID: HRGMv2_0312_16_41
Type: TC
Location: 52890 - 53897 (-)
Type: TC
Location: 52890 - 53897 (-)
Gene ID: HRGMv2_0312_16_42
Type: pfam
Location: 53969 - 55426 (-)
Type: pfam
Location: 53969 - 55426 (-)
Gene ID: HRGMv2_0312_16_43
Type: pfam
Location: 55568 - 56266 (+)
Type: pfam
Location: 55568 - 56266 (+)
Gene ID: HRGMv2_0312_16_44
Type: TC
Location: 56299 - 58191 (-)
Type: TC
Location: 56299 - 58191 (-)
Gene ID: HRGMv2_0312_16_45
Type: pfam
Location: 58712 - 59917 (-)
Type: pfam
Location: 58712 - 59917 (-)
Gene ID: HRGMv2_0312_16_46
Type: TC
Location: 60091 - 62796 (+)
Type: TC
Location: 60091 - 62796 (+)
Gene ID: HRGMv2_0312_16_47
Type: pfam
Location: 62908 - 63669 (-)
Type: pfam
Location: 62908 - 63669 (-)
Gene ID: HRGMv2_0312_16_48
Type: TC
Location: 63828 - 64805 (-)
Type: TC
Location: 63828 - 64805 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp900760735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.