Cluster: HRGMv2_0312_CGC36
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: HRGMv2_0312
- CGC Family ID: CGCFAM_00001
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0312_17 | HRGMv2_0312_17_9 | 16050 | 19040 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0312_17 | HRGMv2_0312_17_10 | 19070 | 20797 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | HRGMv2_0312_17 | HRGMv2_0312_17_11 | 20828 | 21295 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0312_17 | HRGMv2_0312_17_12 | 21551 | 23008 | + | GH27 |
Gene ID: HRGMv2_0312_17_9
Type: TC
Location: 16050 - 19040 (+)
Type: TC
Location: 16050 - 19040 (+)
Gene ID: HRGMv2_0312_17_10
Type: pfam
Location: 19070 - 20797 (+)
Type: pfam
Location: 19070 - 20797 (+)
Gene ID: HRGMv2_0312_17_11
Type:
Location: 20828 - 21295 (+)
Type:
Location: 20828 - 21295 (+)
Gene ID: HRGMv2_0312_17_12
Type: CAZyme
Location: 21551 - 23008 (+)
Type: CAZyme
Location: 21551 - 23008 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp900760735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.