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Cluster: HRGMv2_0312_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0312_12 HRGMv2_0312_12_55 92268 93263 + GH43_17
pfam HRGMv2_0312_12 HRGMv2_0312_12_56 93395 95131 - SusD_RagB | SusD-like_3
TC HRGMv2_0312_12 HRGMv2_0312_12_57 95153 98275 - 1.B.14.6.1
TF HRGMv2_0312_12 HRGMv2_0312_12_58 98398 101136 - HTH_AraC
CAZyme HRGMv2_0312_12 HRGMv2_0312_12_59 101313 103178 + GH32
TC HRGMv2_0312_12 HRGMv2_0312_12_60 103203 104387 + 2.A.1.7.17
STP HRGMv2_0312_12 HRGMv2_0312_12_61 104412 105290 + PfkB
pfam HRGMv2_0312_12 HRGMv2_0312_12_62 105413 105919 + PepSY_like | PepSY_like
TC HRGMv2_0312_12 HRGMv2_0312_12_63 106411 108243 + 2.A.47.4.8
Gene ID: HRGMv2_0312_12_55
Type: CAZyme
Location: 92268 - 93263 (+)
Gene ID: HRGMv2_0312_12_56
Type: pfam
Location: 93395 - 95131 (-)
Gene ID: HRGMv2_0312_12_57
Type: TC
Location: 95153 - 98275 (-)
Gene ID: HRGMv2_0312_12_58
Type: TF
Location: 98398 - 101136 (-)
Gene ID: HRGMv2_0312_12_59
Type: CAZyme
Location: 101313 - 103178 (+)
Gene ID: HRGMv2_0312_12_60
Type: TC
Location: 103203 - 104387 (+)
Gene ID: HRGMv2_0312_12_61
Type: STP
Location: 104412 - 105290 (+)
Gene ID: HRGMv2_0312_12_62
Type: pfam
Location: 105413 - 105919 (+)
Gene ID: HRGMv2_0312_12_63
Type: TC
Location: 106411 - 108243 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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