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Genome Details

Selected Rep_genome_ID: C54.bin_6
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→
Species
Bacteroides intestinalis_A
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
C54.bin_6 6,146,234 99.13% 0% China(Inner Mongolia) Asia IMGG
CGMR096973 6,295,027 97.22% 1.49% China Asia CGMR
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
C54.bin_6_CGC1 CGCFAM_00001 Yes 7 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
C54.bin_6_CGC23 CGCFAM_00001 Yes 6 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
C54.bin_6_CGC11 CGCFAM_00016 Yes 14 7 host glycan
C54.bin_6_CGC57 CGCFAM_00023 Yes 3 1
C54.bin_6_CGC101 CGCFAM_00025 Yes 9 5 pectin/alpha-glucan
C54.bin_6_CGC14 CGCFAM_00025 Yes 4 1 pectin/alpha-glucan
C54.bin_6_CGC35 CGCFAM_00033 Yes 7 5
C54.bin_6_CGC37 CGCFAM_00043 Yes 10 3 alpha-glucan
C54.bin_6_CGC39 CGCFAM_00050 Yes 5 3
C54.bin_6_CGC81 CGCFAM_00079 Yes 8 4 pectin
C54.bin_6_CGC66 CGCFAM_00080 Yes 3 1
C54.bin_6_CGC79 CGCFAM_00110 Yes 7 4 pectin/host glycan
C54.bin_6_CGC89 CGCFAM_00120 Yes 3 2
C54.bin_6_CGC82 CGCFAM_00138 Yes 8 2
C54.bin_6_CGC51 CGCFAM_00143 Yes 9 4
C54.bin_6_CGC12 CGCFAM_00170 Yes 7 4
C54.bin_6_CGC76 CGCFAM_00175 Yes 6 3 alpha-glucan
C54.bin_6_CGC99 CGCFAM_00184 Yes 11 4
C54.bin_6_CGC92 CGCFAM_00217 Yes 19 13
C54.bin_6_CGC67 CGCFAM_00239 Yes 10 7 xylan
PUL0545_C54.bin_6_C0 CGCFAM_00239 Yes 9 5 xylan
PUL0644_C54.bin_6_C0 CGCFAM_00239 Yes 11 7 xylan
C54.bin_6_CGC42 CGCFAM_00266 Yes 5 1
C54.bin_6_CGC56 CGCFAM_00275 Yes 11 4
C54.bin_6_CGC50 CGCFAM_00297 Yes 15 6
Top CAZyme Families