Cluster: C54.bin_6_CGC37
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: C54.bin_6
- CGC Family ID: CGCFAM_00043
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C54_contig_3258 | C54_contig_3258_714 | 841923 | 844922 | + | 1.B.14.6.1 |
| TC | C54_contig_3258 | C54_contig_3258_715 | 844934 | 846424 | + | 8.A.46.1.5 |
| pfam | C54_contig_3258 | C54_contig_3258_716 | 846447 | 847943 | + | SusE | SusF_SusE | SusF_SusE |
| CAZyme | C54_contig_3258 | C54_contig_3258_717 | 847948 | 849738 | + | GH66 |
| CAZyme | C54_contig_3258 | C54_contig_3258_718 | 849759 | 852257 | + | GH31 |
| CAZyme | C54_contig_3258 | C54_contig_3258_719 | 852281 | 854434 | + | GH97 |
| pfam | C54_contig_3258 | C54_contig_3258_720 | 854524 | 855180 | - | DUF4919 |
| pfam | C54_contig_3258 | C54_contig_3258_721 | 855424 | 856134 | - | DUF169 |
| TC | C54_contig_3258 | C54_contig_3258_722 | 856563 | 858227 | - | 4.C.1.1.16 |
| TC | C54_contig_3258 | C54_contig_3258_723 | 858769 | 860223 | - | 2.A.36.6.11 |
Gene ID: C54_contig_3258_714
Type: TC
Location: 841923 - 844922 (+)
Type: TC
Location: 841923 - 844922 (+)
Gene ID: C54_contig_3258_715
Type: TC
Location: 844934 - 846424 (+)
Type: TC
Location: 844934 - 846424 (+)
Gene ID: C54_contig_3258_716
Type: pfam
Location: 846447 - 847943 (+)
Type: pfam
Location: 846447 - 847943 (+)
Gene ID: C54_contig_3258_717
Type: CAZyme
Location: 847948 - 849738 (+)
Type: CAZyme
Location: 847948 - 849738 (+)
Gene ID: C54_contig_3258_718
Type: CAZyme
Location: 849759 - 852257 (+)
Type: CAZyme
Location: 849759 - 852257 (+)
Gene ID: C54_contig_3258_719
Type: CAZyme
Location: 852281 - 854434 (+)
Type: CAZyme
Location: 852281 - 854434 (+)
Gene ID: C54_contig_3258_720
Type: pfam
Location: 854524 - 855180 (-)
Type: pfam
Location: 854524 - 855180 (-)
Gene ID: C54_contig_3258_721
Type: pfam
Location: 855424 - 856134 (-)
Type: pfam
Location: 855424 - 856134 (-)
Gene ID: C54_contig_3258_722
Type: TC
Location: 856563 - 858227 (-)
Type: TC
Location: 856563 - 858227 (-)
Gene ID: C54_contig_3258_723
Type: TC
Location: 858769 - 860223 (-)
Type: TC
Location: 858769 - 860223 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides intestinalis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.