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Cluster: C54.bin_6_CGC81

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C54_scaffold_3399 C54_scaffold_3399_923 1341489 1342358 - GH144
CAZyme C54_scaffold_3399 C54_scaffold_3399_924 1342767 1345088 - GH3
TC C54_scaffold_3399 C54_scaffold_3399_925 1345164 1346681 - 8.A.46.1.3
TC C54_scaffold_3399 C54_scaffold_3399_926 1346727 1349765 - 1.B.14.6.1
CAZyme C54_scaffold_3399 C54_scaffold_3399_927 1350059 1351393 - GH144
CAZyme C54_scaffold_3399 C54_scaffold_3399_928 1351497 1353824 - GH3
pfam C54_scaffold_3399 C54_scaffold_3399_929 1354121 1355641 - SusD_RagB | SusD-like_2 | SusD-like_3
TC C54_scaffold_3399 C54_scaffold_3399_930 1355676 1358714 - 1.B.14.6.1
Gene ID: C54_scaffold_3399_923
Type: CAZyme
Location: 1341489 - 1342358 (-)
Gene ID: C54_scaffold_3399_924
Type: CAZyme
Location: 1342767 - 1345088 (-)
Gene ID: C54_scaffold_3399_925
Type: TC
Location: 1345164 - 1346681 (-)
Gene ID: C54_scaffold_3399_926
Type: TC
Location: 1346727 - 1349765 (-)
Gene ID: C54_scaffold_3399_927
Type: CAZyme
Location: 1350059 - 1351393 (-)
Gene ID: C54_scaffold_3399_928
Type: CAZyme
Location: 1351497 - 1353824 (-)
Gene ID: C54_scaffold_3399_929
Type: pfam
Location: 1354121 - 1355641 (-)
Gene ID: C54_scaffold_3399_930
Type: TC
Location: 1355676 - 1358714 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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