Cluster: C54.bin_6_CGC39
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: C54.bin_6
- CGC Family ID: CGCFAM_00050
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C54_contig_3258 | C54_contig_3258_845 | 1011359 | 1011748 | - | 9.B.18.1.1 |
| CAZyme | C54_contig_3258 | C54_contig_3258_846 | 1012026 | 1013132 | - | GT4 |
| pfam | C54_contig_3258 | C54_contig_3258_847 | 1013129 | 1014151 | - | Radical_SAM | SPASM |
| CAZyme | C54_contig_3258 | C54_contig_3258_848 | 1014191 | 1015381 | - | GT4 |
| CAZyme | C54_contig_3258 | C54_contig_3258_849 | 1015393 | 1016289 | - | GT2 |
Gene ID: C54_contig_3258_845
Type: TC
Location: 1011359 - 1011748 (-)
Type: TC
Location: 1011359 - 1011748 (-)
Gene ID: C54_contig_3258_846
Type: CAZyme
Location: 1012026 - 1013132 (-)
Type: CAZyme
Location: 1012026 - 1013132 (-)
Gene ID: C54_contig_3258_847
Type: pfam
Location: 1013129 - 1014151 (-)
Type: pfam
Location: 1013129 - 1014151 (-)
Gene ID: C54_contig_3258_848
Type: CAZyme
Location: 1014191 - 1015381 (-)
Type: CAZyme
Location: 1014191 - 1015381 (-)
Gene ID: C54_contig_3258_849
Type: CAZyme
Location: 1015393 - 1016289 (-)
Type: CAZyme
Location: 1015393 - 1016289 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides intestinalis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.