Cluster: C54.bin_6_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: C54.bin_6
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C54_contig_1855 | C54_contig_1855_614 | 797189 | 800614 | + | 1.B.14.6.1 |
| pfam | C54_contig_1855 | C54_contig_1855_615 | 800630 | 802258 | + | SusD_RagB | SusD-like_2 | SusD-like_3 |
| sulfatase | C54_contig_1855 | C54_contig_1855_616 | 802278 | 803693 | + | S1_20 |
| CAZyme | C54_contig_1855 | C54_contig_1855_617 | 804019 | 806448 | + | GH2 |
| CAZyme | C54_contig_1855 | C54_contig_1855_618 | 806509 | 808134 | + | GH27 |
| CAZyme | C54_contig_1855 | C54_contig_1855_619 | 808124 | 809905 | + | GH78 |
Gene ID: C54_contig_1855_614
Type: TC
Location: 797189 - 800614 (+)
Type: TC
Location: 797189 - 800614 (+)
Gene ID: C54_contig_1855_615
Type: pfam
Location: 800630 - 802258 (+)
Type: pfam
Location: 800630 - 802258 (+)
Gene ID: C54_contig_1855_616
Type: sulfatase
Location: 802278 - 803693 (+)
Type: sulfatase
Location: 802278 - 803693 (+)
Gene ID: C54_contig_1855_617
Type: CAZyme
Location: 804019 - 806448 (+)
Type: CAZyme
Location: 804019 - 806448 (+)
Gene ID: C54_contig_1855_618
Type: CAZyme
Location: 806509 - 808134 (+)
Type: CAZyme
Location: 806509 - 808134 (+)
Gene ID: C54_contig_1855_619
Type: CAZyme
Location: 808124 - 809905 (+)
Type: CAZyme
Location: 808124 - 809905 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides intestinalis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.