Cluster: C54.bin_6_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: pectin/alpha-glucan
- Genome ID: C54.bin_6
- CGC Family ID: CGCFAM_00025
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C54_contig_1855 | C54_contig_1855_117 | 145975 | 147813 | - | GH13_46 |
| pfam | C54_contig_1855 | C54_contig_1855_118 | 147820 | 148926 | - | SusE | SusF_SusE |
| TC | C54_contig_1855 | C54_contig_1855_119 | 148958 | 150535 | - | 8.A.46.1.1 |
| TC | C54_contig_1855 | C54_contig_1855_120 | 150579 | 153539 | - | 1.B.14.6.1 |
Gene ID: C54_contig_1855_117
Type: CAZyme
Location: 145975 - 147813 (-)
Type: CAZyme
Location: 145975 - 147813 (-)
Gene ID: C54_contig_1855_118
Type: pfam
Location: 147820 - 148926 (-)
Type: pfam
Location: 147820 - 148926 (-)
Gene ID: C54_contig_1855_119
Type: TC
Location: 148958 - 150535 (-)
Type: TC
Location: 148958 - 150535 (-)
Gene ID: C54_contig_1855_120
Type: TC
Location: 150579 - 153539 (-)
Type: TC
Location: 150579 - 153539 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides intestinalis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.