dbCAN HGM

Cluster: C54.bin_6_CGC82

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	C54_scaffold_3399	C54_scaffold_3399_947	1382373	1383836	-	GT2
pfam	C54_scaffold_3399	C54_scaffold_3399_948	1383869	1385728	-	Metallophos \| PQQ \| PQQ \| PQQ \| PQQ_2 \| PQQ_2 \| PQQ_2 \| Beta-prop_ACSF4 \| Beta-prop_ACSF4 \| Beta-prop_ACSF4 \| Beta-prop_ACSF4
NULL(UNKNOWN)	C54_scaffold_3399	C54_scaffold_3399_949	1385752	1388901	-	NULL(UNKNOWN) [View Structural Homologs]
TC	C54_scaffold_3399	C54_scaffold_3399_950	1388924	1390372	-	2.A.21.3.7
CAZyme	C54_scaffold_3399	C54_scaffold_3399_951	1390414	1391580	-	GH171
NULL(UNKNOWN)	C54_scaffold_3399	C54_scaffold_3399_952	1391820	1392764	-	NULL(UNKNOWN) [View Structural Homologs]
pfam	C54_scaffold_3399	C54_scaffold_3399_953	1392790	1394709	-	SusD-like \| SusD-like \| SusD-like_2 \| SusD-like_2
TC	C54_scaffold_3399	C54_scaffold_3399_954	1394728	1397898	-	1.B.14.6.2

Gene ID: C54_scaffold_3399_947
Type: CAZyme
Location: 1382373 - 1383836 (-)

Gene ID: C54_scaffold_3399_948
Type: pfam
Location: 1383869 - 1385728 (-)

Gene ID: C54_scaffold_3399_949
Type:
Location: 1385752 - 1388901 (-)

Gene ID: C54_scaffold_3399_950
Type: TC
Location: 1388924 - 1390372 (-)

Gene ID: C54_scaffold_3399_951
Type: CAZyme
Location: 1390414 - 1391580 (-)

Gene ID: C54_scaffold_3399_952
Type:
Location: 1391820 - 1392764 (-)

Gene ID: C54_scaffold_3399_953
Type: pfam
Location: 1392790 - 1394709 (-)

Gene ID: C54_scaffold_3399_954
Type: TC
Location: 1394728 - 1397898 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.