PROTEIN: C54_scaffold_3399_952
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Protein File & Metadata
Source:
C54_scaffold_3399_952.pdb
Genome ID:
Protein ID:
C54_scaffold_3399_952
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Protein Sequence
MKKIKYISIA LLATSFMGSC EKMEVDYDAI PVGDDMAQFQ IGHYTPITTS AENNIYKVEL 60 DGKLLANNTN VLKYYNTIPG ASRFYYAKPG KANLKLYQGT DLKLVFDQDI TLIKGKQNVI 120 VHDYNASPII LERNFDIPYP LDPSKATFDT DTIGYIRFIN LMYENEGQPT TMKLQYQYQY 180 TLHPLYTNAD KDAGLIPDGK KVGDATGDAT KSAWLNLGSP VAFGESTGFQ PVPVKKTTYI 240 AQGAARIDFR IVVTAANGGV PGETVMDNVD WLLKVNGKLY TDYWNITIGR YTTHYFAGLR 300 NKATVVKAYS YAEH 314
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q55GU5-F1-model_v4 | 30 | 314 | 99 | 344 | 0.4673 |
0.695 |
| AF-Q9JIP7-F1-model_v4 | 31 | 314 | 389 | 576 | 0.3515 |
0.7674 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7pmw-assembly1.cif.gz_A | 23 | 314 | 338 | 532 | 0.3637 |
0.7499 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P59791-F1-model_v4 | 25 | 314 | 31 | 214 | 0.5953 |
0.8345 |
| AF-P70799-F1-model_v4 | 24 | 314 | 31 | 215 | 0.589 |
0.8217 |
| AF-Q887Q8-F1-model_v4 | 25 | 314 | 36 | 218 | 0.5834 |
0.8311 |
| AF-P51574-F1-model_v4 | 31 | 314 | 389 | 577 | 0.3546 |
0.7744 |
| AF-Q9JIP7-F1-model_v4 | 31 | 314 | 389 | 576 | 0.3515 |
0.7674 |
| AF-P46059-F1-model_v4 | 31 | 314 | 388 | 575 | 0.3396 |
0.7387 |