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Cluster: C54.bin_6_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C54_contig_1855 C54_contig_1855_75 85925 86749 + GT5
pfam C54_contig_1855 C54_contig_1855_76 86770 88317 + DUF4270
CAZyme C54_contig_1855 C54_contig_1855_77 88403 89803 - GH57
CAZyme C54_contig_1855 C54_contig_1855_78 89822 91093 - GT4
CAZyme C54_contig_1855 C54_contig_1855_79 91108 93048 - GH133
TC C54_contig_1855 C54_contig_1855_80 93241 93981 + 9.B.104.3.2
TC C54_contig_1855 C54_contig_1855_81 93976 94602 - 2.A.124.1.4
Gene ID: C54_contig_1855_75
Type: CAZyme
Location: 85925 - 86749 (+)
Gene ID: C54_contig_1855_76
Type: pfam
Location: 86770 - 88317 (+)
Gene ID: C54_contig_1855_77
Type: CAZyme
Location: 88403 - 89803 (-)
Gene ID: C54_contig_1855_78
Type: CAZyme
Location: 89822 - 91093 (-)
Gene ID: C54_contig_1855_79
Type: CAZyme
Location: 91108 - 93048 (-)
Gene ID: C54_contig_1855_80
Type: TC
Location: 93241 - 93981 (+)
Gene ID: C54_contig_1855_81
Type: TC
Location: 93976 - 94602 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C54_contig_1855_81 vegan > omnivore 1.30757 0.01049
C54_contig_1855_81 vegetarian > omnivore 1.27483 0.00141

🧭 Explore Read Mapping of CGC

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