Cluster: C54.bin_6_CGC42
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C54.bin_6
- CGC Family ID: CGCFAM_00266
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C54_contig_3258 | C54_contig_3258_1211 | 1413209 | 1414810 | - | 8.A.46.2.1 |
| TC | C54_contig_3258 | C54_contig_3258_1212 | 1414810 | 1417947 | - | 1.B.14.6.13 |
| pfam | C54_contig_3258 | C54_contig_3258_1213 | 1418048 | 1418656 | + | DUF179 |
| pfam | C54_contig_3258 | C54_contig_3258_1214 | 1418653 | 1419186 | - | Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_4 |
| CAZyme | C54_contig_3258 | C54_contig_3258_1215 | 1419187 | 1420395 | - | GT2 |
Gene ID: C54_contig_3258_1211
Type: TC
Location: 1413209 - 1414810 (-)
Type: TC
Location: 1413209 - 1414810 (-)
Gene ID: C54_contig_3258_1212
Type: TC
Location: 1414810 - 1417947 (-)
Type: TC
Location: 1414810 - 1417947 (-)
Gene ID: C54_contig_3258_1213
Type: pfam
Location: 1418048 - 1418656 (+)
Type: pfam
Location: 1418048 - 1418656 (+)
Gene ID: C54_contig_3258_1214
Type: pfam
Location: 1418653 - 1419186 (-)
Type: pfam
Location: 1418653 - 1419186 (-)
Gene ID: C54_contig_3258_1215
Type: CAZyme
Location: 1419187 - 1420395 (-)
Type: CAZyme
Location: 1419187 - 1420395 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides intestinalis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.