Cluster: PUL0545_C54.bin_6_C0
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 5
- Substrate: xylan
- Genome ID: C54.bin_6
- CGC Family ID: CGCFAM_00239
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0545_C54.bin_6_C0 | C54_scaffold_3399_425 | 617513 | 618670 | + | CE1 |
| NULL(UNKNOWN) | PUL0545_C54.bin_6_C0 | C54_scaffold_3399_426 | 618699 | 619397 | + | NULL(UNKNOWN) |
| CAZyme | PUL0545_C54.bin_6_C0 | C54_scaffold_3399_427 | 619400 | 620851 | + | GH43_7 | GH43_7 |
| TC | PUL0545_C54.bin_6_C0 | C54_scaffold_3399_428 | 621112 | 624243 | + | 1.B.14.6.1 |
| pfam | PUL0545_C54.bin_6_C0 | C54_scaffold_3399_429 | 624267 | 626003 | + | SusD_RagB |
| CAZyme | PUL0545_C54.bin_6_C0 | C54_scaffold_3399_432 | 628609 | 629667 | + | GH43_17 |
| CAZyme | PUL0545_C54.bin_6_C0 | C54_scaffold_3399_433 | 629716 | 632304 | + | GH3 |
| CAZyme | PUL0545_C54.bin_6_C0 | C54_scaffold_3399_434 | 632405 | 633736 | + | CBM6 | GH43_2 |
| TF | PUL0545_C54.bin_6_C0 | C54_scaffold_3399_435 | 633756 | 637850 | + | HTH_AraC |
Gene ID: C54_scaffold_3399_425
Type: CAZyme
Location: 617513 - 618670 (+)
Type: CAZyme
Location: 617513 - 618670 (+)
Gene ID: C54_scaffold_3399_426
Type: null
Location: 618699 - 619397 (+)
Type: null
Location: 618699 - 619397 (+)
Gene ID: C54_scaffold_3399_427
Type: CAZyme
Location: 619400 - 620851 (+)
Type: CAZyme
Location: 619400 - 620851 (+)
Gene ID: C54_scaffold_3399_428
Type: TC
Location: 621112 - 624243 (+)
Type: TC
Location: 621112 - 624243 (+)
Gene ID: C54_scaffold_3399_429
Type: pfam
Location: 624267 - 626003 (+)
Type: pfam
Location: 624267 - 626003 (+)
Gene ID: C54_scaffold_3399_432
Type: CAZyme
Location: 628609 - 629667 (+)
Type: CAZyme
Location: 628609 - 629667 (+)
Gene ID: C54_scaffold_3399_433
Type: CAZyme
Location: 629716 - 632304 (+)
Type: CAZyme
Location: 629716 - 632304 (+)
Gene ID: C54_scaffold_3399_434
Type: CAZyme
Location: 632405 - 633736 (+)
Type: CAZyme
Location: 632405 - 633736 (+)
Gene ID: C54_scaffold_3399_435
Type: TF
Location: 633756 - 637850 (+)
Type: TF
Location: 633756 - 637850 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides intestinalis_A
Gene Composition
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