Genome Details
Selected Rep_genome_ID: Rep_1398
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900766315
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| Rep_1398 | 3,926,186 | 100% | 3.63799% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_1398_CGC39 | CGCFAM_00002 | Yes | 7 | 4 | |
| Rep_1398_CGC5 | CGCFAM_00020 | Yes | 6 | 2 | host glycan/beta-glucan |
| Rep_1398_CGC4 | CGCFAM_00035 | Yes | 9 | 2 | fructan |
| Rep_1398_CGC38 | CGCFAM_00040 | Yes | 4 | 3 | |
| Rep_1398_CGC15 | CGCFAM_00097 | Yes | 4 | 1 | |
| Rep_1398_CGC19 | CGCFAM_00162 | Yes | 6 | 3 | |
| Rep_1398_CGC32 | CGCFAM_00276 | Yes | 3 | 1 | |
| Rep_1398_CGC8 | CGCFAM_00550 | Yes | 6 | 3 | |
| Rep_1398_CGC28 | CGCFAM_00658 | Yes | 21 | 11 | |
| Rep_1398_CGC20 | CGCFAM_01057 | Yes | 9 | 4 | |
| Rep_1398_CGC3 | CGCFAM_01215 | Yes | 4 | 1 | |
| Rep_1398_CGC21 | CGCFAM_01247 | Yes | 9 | 1 | |
| Rep_1398_CGC50 | CGCFAM_01455 | Yes | 7 | 1 | |
| Rep_1398_CGC2 | CGCFAM_01922 | Yes | 6 | 2 | |
| Rep_1398_CGC31 | CGCFAM_02256 | Yes | 5 | 1 | |
| Rep_1398_CGC29 | CGCFAM_02412 | Yes | 12 | 4 | |
| Rep_1398_CGC44 | CGCFAM_03132 | Yes | 3 | 1 | |
| Rep_1398_CGC51 | CGCFAM_03703 | Yes | 3 | 1 | |
| Rep_1398_CGC41 | CGCFAM_03840 | Yes | 12 | 3 | |
| Rep_1398_CGC53 | CGCFAM_05631 | Yes | 3 | 1 | |
| Rep_1398_CGC54 | CGCFAM_05634 | Yes | 8 | 1 | |
| Rep_1398_CGC1 | CGCFAM_05836 | Yes | 4 | 1 | |
| Rep_1398_CGC16 | CGCFAM_08691 | Yes | 3 | 1 |
Top CAZyme Families