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Cluster: Rep_1398_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1398_c_93 Rep_1398_c_93_3 5372 6088 + 2.A.115.2.12
pfam Rep_1398_c_93 Rep_1398_c_93_4 6275 6529 + DUF6198
pfam Rep_1398_c_93 Rep_1398_c_93_5 6875 7711 + PRD | PRD | CAT_RBD
TC Rep_1398_c_93 Rep_1398_c_93_6 8090 9958 + 4.A.1.2.11
CAZyme Rep_1398_c_93 Rep_1398_c_93_7 10068 11507 + GH1
pfam Rep_1398_c_93 Rep_1398_c_93_8 11663 12523 + Hydrolase | S6PP | S6PP | Hydrolase_3
TC Rep_1398_c_93 Rep_1398_c_93_9 12941 13720 - 2.A.5.5.5
TC Rep_1398_c_93 Rep_1398_c_93_10 13844 14527 + 9.B.120.1.3
TC Rep_1398_c_93 Rep_1398_c_93_11 14646 15353 + 9.B.116.3.1
Gene ID: Rep_1398_c_93_3
Type: TC
Location: 5372 - 6088 (+)
Gene ID: Rep_1398_c_93_4
Type: pfam
Location: 6275 - 6529 (+)
Gene ID: Rep_1398_c_93_5
Type: pfam
Location: 6875 - 7711 (+)
Gene ID: Rep_1398_c_93_6
Type: TC
Location: 8090 - 9958 (+)
Gene ID: Rep_1398_c_93_7
Type: CAZyme
Location: 10068 - 11507 (+)
Gene ID: Rep_1398_c_93_8
Type: pfam
Location: 11663 - 12523 (+)
Gene ID: Rep_1398_c_93_9
Type: TC
Location: 12941 - 13720 (-)
Gene ID: Rep_1398_c_93_10
Type: TC
Location: 13844 - 14527 (+)
Gene ID: Rep_1398_c_93_11
Type: TC
Location: 14646 - 15353 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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