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Cluster: Rep_1398_CGC50

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1398_c_168 Rep_1398_c_168_12 9853 11019 - GH33
NULL(UNKNOWN) Rep_1398_c_168 Rep_1398_c_168_13 11190 11354 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1398_c_168 Rep_1398_c_168_14 11387 13060 - 3.A.1.5.2
TC Rep_1398_c_168 Rep_1398_c_168_15 13183 14163 - 3.A.1.5.20
TC Rep_1398_c_168 Rep_1398_c_168_16 14163 15170 - 3.A.1.5.2
TC Rep_1398_c_168 Rep_1398_c_168_17 15183 16151 - 3.A.1.5.2
TC Rep_1398_c_168 Rep_1398_c_168_18 16166 17083 - 3.A.1.5.19
Gene ID: Rep_1398_c_168_12
Type: CAZyme
Location: 9853 - 11019 (-)
Gene ID: Rep_1398_c_168_13
Type:
Location: 11190 - 11354 (+)
Gene ID: Rep_1398_c_168_14
Type: TC
Location: 11387 - 13060 (-)
Gene ID: Rep_1398_c_168_15
Type: TC
Location: 13183 - 14163 (-)
Gene ID: Rep_1398_c_168_16
Type: TC
Location: 14163 - 15170 (-)
Gene ID: Rep_1398_c_168_17
Type: TC
Location: 15183 - 16151 (-)
Gene ID: Rep_1398_c_168_18
Type: TC
Location: 16166 - 17083 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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