Cluster: Rep_1398_CGC53
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1398
- CGC Family ID: CGCFAM_05631
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1398_c_178 | Rep_1398_c_178_10 | 11238 | 17663 | + | CBM32 | CBM32 | GH84 | GH84 |
| pfam | Rep_1398_c_178 | Rep_1398_c_178_11 | 17855 | 18307 | + | RibD_C |
| TC | Rep_1398_c_178 | Rep_1398_c_178_12 | 18494 | 19879 | + | 2.A.3.8.12 |
Gene ID: Rep_1398_c_178_10
Type: CAZyme
Location: 11238 - 17663 (+)
Type: CAZyme
Location: 11238 - 17663 (+)
Gene ID: Rep_1398_c_178_11
Type: pfam
Location: 17855 - 18307 (+)
Type: pfam
Location: 17855 - 18307 (+)
Gene ID: Rep_1398_c_178_12
Type: TC
Location: 18494 - 19879 (+)
Type: TC
Location: 18494 - 19879 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900766315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.