Cluster: Rep_1398_CGC44
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1398
- CGC Family ID: CGCFAM_03132
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1398_c_131 | Rep_1398_c_131_18 | 20238 | 22574 | - | GH31_1 |
| TF | Rep_1398_c_131 | Rep_1398_c_131_19 | 22714 | 23613 | + | HTH_AraC | HTH_AraC |
| TC | Rep_1398_c_131 | Rep_1398_c_131_20 | 23675 | 26251 | - | 3.A.1.137.2 |
Gene ID: Rep_1398_c_131_18
Type: CAZyme
Location: 20238 - 22574 (-)
Type: CAZyme
Location: 20238 - 22574 (-)
Gene ID: Rep_1398_c_131_19
Type: TF
Location: 22714 - 23613 (+)
Type: TF
Location: 22714 - 23613 (+)
Gene ID: Rep_1398_c_131_20
Type: TC
Location: 23675 - 26251 (-)
Type: TC
Location: 23675 - 26251 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900766315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.