Cluster: Rep_1398_CGC38
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_1398
- CGC Family ID: CGCFAM_00040
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1398_c_122 | Rep_1398_c_122_19 | 17237 | 18115 | + | GT2 |
| CAZyme | Rep_1398_c_122 | Rep_1398_c_122_20 | 18139 | 19053 | + | GT2 |
| CAZyme | Rep_1398_c_122 | Rep_1398_c_122_21 | 19066 | 20232 | + | GT4 |
| TC | Rep_1398_c_122 | Rep_1398_c_122_22 | 20234 | 21673 | + | 2.A.66.2.16 |
Gene ID: Rep_1398_c_122_19
Type: CAZyme
Location: 17237 - 18115 (+)
Type: CAZyme
Location: 17237 - 18115 (+)
Gene ID: Rep_1398_c_122_20
Type: CAZyme
Location: 18139 - 19053 (+)
Type: CAZyme
Location: 18139 - 19053 (+)
Gene ID: Rep_1398_c_122_21
Type: CAZyme
Location: 19066 - 20232 (+)
Type: CAZyme
Location: 19066 - 20232 (+)
Gene ID: Rep_1398_c_122_22
Type: TC
Location: 20234 - 21673 (+)
Type: TC
Location: 20234 - 21673 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900766315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.