Cluster: Rep_1398_CGC51
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1398
- CGC Family ID: CGCFAM_03703
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1398_c_172 | Rep_1398_c_172_4 | 4390 | 6141 | - | CBM34 | GH13_20 |
| TF | Rep_1398_c_172 | Rep_1398_c_172_5 | 6267 | 6938 | + | HTH_AraC | HTH_AraC |
| TC | Rep_1398_c_172 | Rep_1398_c_172_6 | 7246 | 8688 | - | 3.A.18.1.1 |
Gene ID: Rep_1398_c_172_4
Type: CAZyme
Location: 4390 - 6141 (-)
Type: CAZyme
Location: 4390 - 6141 (-)
Gene ID: Rep_1398_c_172_5
Type: TF
Location: 6267 - 6938 (+)
Type: TF
Location: 6267 - 6938 (+)
Gene ID: Rep_1398_c_172_6
Type: TC
Location: 7246 - 8688 (-)
Type: TC
Location: 7246 - 8688 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900766315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.