Cluster: Rep_1398_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_1398
- CGC Family ID: CGCFAM_00162
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1398_c_70 | Rep_1398_c_70_13 | 12868 | 14268 | - | 2.A.66.1.32 |
| NULL(UNKNOWN) | Rep_1398_c_70 | Rep_1398_c_70_14 | 14426 | 14827 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1398_c_70 | Rep_1398_c_70_15 | 15251 | 16897 | - | CBM91 | GH43_11 |
| CAZyme | Rep_1398_c_70 | Rep_1398_c_70_16 | 17016 | 19019 | - | GH42 |
| TC | Rep_1398_c_70 | Rep_1398_c_70_17 | 19095 | 20513 | - | 2.A.2.3.3 |
| CAZyme | Rep_1398_c_70 | Rep_1398_c_70_18 | 20543 | 21709 | - | GH5_44 |
Gene ID: Rep_1398_c_70_13
Type: TC
Location: 12868 - 14268 (-)
Type: TC
Location: 12868 - 14268 (-)
Gene ID: Rep_1398_c_70_14
Type:
Location: 14426 - 14827 (-)
Type:
Location: 14426 - 14827 (-)
Gene ID: Rep_1398_c_70_15
Type: CAZyme
Location: 15251 - 16897 (-)
Type: CAZyme
Location: 15251 - 16897 (-)
Gene ID: Rep_1398_c_70_16
Type: CAZyme
Location: 17016 - 19019 (-)
Type: CAZyme
Location: 17016 - 19019 (-)
Gene ID: Rep_1398_c_70_17
Type: TC
Location: 19095 - 20513 (-)
Type: TC
Location: 19095 - 20513 (-)
Gene ID: Rep_1398_c_70_18
Type: CAZyme
Location: 20543 - 21709 (-)
Type: CAZyme
Location: 20543 - 21709 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900766315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.