Cluster: Rep_1398_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_1398
- CGC Family ID: CGCFAM_00550
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1398_c_17 | Rep_1398_c_17_4 | 2673 | 4070 | + | GH1 |
| NULL(UNKNOWN) | Rep_1398_c_17 | Rep_1398_c_17_5 | 4268 | 4852 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_1398_c_17 | Rep_1398_c_17_6 | 5062 | 6357 | + | Enolase_C | Enolase_N |
| CAZyme | Rep_1398_c_17 | Rep_1398_c_17_7 | 6588 | 7661 | + | GT28 |
| CAZyme | Rep_1398_c_17 | Rep_1398_c_17_8 | 7664 | 8347 | + | CE4 |
| TC | Rep_1398_c_17 | Rep_1398_c_17_9 | 8340 | 9419 | + | 4.D.2.1.5 |
Gene ID: Rep_1398_c_17_4
Type: CAZyme
Location: 2673 - 4070 (+)
Type: CAZyme
Location: 2673 - 4070 (+)
Gene ID: Rep_1398_c_17_5
Type:
Location: 4268 - 4852 (+)
Type:
Location: 4268 - 4852 (+)
Gene ID: Rep_1398_c_17_6
Type: pfam
Location: 5062 - 6357 (+)
Type: pfam
Location: 5062 - 6357 (+)
Gene ID: Rep_1398_c_17_7
Type: CAZyme
Location: 6588 - 7661 (+)
Type: CAZyme
Location: 6588 - 7661 (+)
Gene ID: Rep_1398_c_17_8
Type: CAZyme
Location: 7664 - 8347 (+)
Type: CAZyme
Location: 7664 - 8347 (+)
Gene ID: Rep_1398_c_17_9
Type: TC
Location: 8340 - 9419 (+)
Type: TC
Location: 8340 - 9419 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900766315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.