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PROTEIN: Rep_1398_c_17_5

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Protein File & Metadata
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Source:
Rep_1398_c_17_5.pdb
Genome ID:
Rep_1398
Protein ID:
Rep_1398_c_17_5

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Protein Sequence 
MARTYAYSAD   FDKDIESLFK   DAKLLGEGHN   GIVYEVPGNR   AIKIFTDKNV   CKSEAEILYR 60
VKKSKYFPKI   YKSGDYYILR   DMVNGERLDD   YIQENGLSQQ   LIYNLYRLIN   EFKSLKFTKL 120
DARCRDIYVD   KNQRLKVIDP   KQCYKRKVDY   PRHLMKGLDG   IDVLEEFLRG   IYIIDKRRGA 180
EWEEKINQYY   AREY 194
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0N4UDY7-F1-model_v4 11 194 2 197 0.7039 0.7823
AF-B5WWL2-F1-model_v4 10 194 19 243 0.681 0.819
AF-Q54W07-F1-model_v4 9 194 29 250 0.648 0.7855
AF-Q58473-F1-model_v4 4 185 46 264 0.6379 0.8053
AF-U7PIN8-F1-model_v4 20 186 1 225 0.5836 0.7959
AF-X8F8F2-F1-model_v4 6 184 21 240 0.5763 0.735
AF-A0A0K0IM83-F1-model_v4 6 186 1 283 0.565 0.7584
AF-J9F605-F1-model_v4 6 186 1 283 0.5615 0.7526
AF-A0A0D2DGB7-F1-model_v4 6 186 10 247 0.5593 0.7545
AF-A0A3P7EIN5-F1-model_v4 12 189 46 230 0.5497 0.675
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0N9I9J3-F1-model_v4 CBM2 6 189 1 245 0.5017 0.7374
AF-W5W9C4-F1-model_v4 CBM2 5 186 6 258 0.4984 0.7518
A0A9R0U8K3 CBM2 5 186 9 265 0.4932 0.7476
AF-A0A0H3D2W5-F1-model_v4 CBM2 6 186 10 265 0.4916 0.7486
AF-A0A0H3D436-F1-model_v4 CBM2 10 189 7 249 0.4856 0.741
AF-A0A7H8HAJ3-F1-model_v4 CBM2 9 189 7 249 0.4834 0.7322
UQU65731.1 CBM13 6 189 7 249 0.4787 0.7461
WDE98161.1 CBM35 10 189 29 284 0.4556 0.7918
AF-A0A1C3N6H9-F1-model_v4 CBM13 9 189 19 265 0.4362 0.7533
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A9R0U8K3 CBM2 5 186 9 265 0.4932 0.7476
C6WHB0 CBM2 6 188 1 253 0.4821 0.7403
UQU65731.1 CBM13 6 189 7 249 0.4787 0.7461
A0A9R0NW47 CBM2 9 189 74 317 0.4713 0.7423
A0A0B5HRL7 GH88 3 186 11 207 0.4561 0.7442
WDE98161.1 CBM35 10 189 29 284 0.4556 0.7918
U5W762 CBM13 6 189 4 254 0.4473 0.7427
D7B6T4 CBM5 2 194 12 351 0.4466 0.6975
A0A5C4WQD5 GH6 6 194 9 660 0.4421 0.7198
A0A1C3N6H9 CBM13 9 189 19 265 0.4362 0.7533
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4d2s-assembly1.cif.gz_A 9 187 6 232 0.5975 0.7455
6c1b-assembly2.cif.gz_B 9 186 3 234 0.5875 0.7432
5fbn-assembly2.cif.gz_D 11 189 3 234 0.5866 0.74
5fbn-assembly1.cif.gz_C 11 189 2 235 0.5847 0.7392
4eqm-assembly6.cif.gz_F 6 189 1 237 0.5822 0.7284
7ju5-assembly1.cif.gz_A 10 189 11 265 0.5805 0.7601
6nvg-assembly1.cif.gz_A 12 186 9 250 0.5784 0.7604
5ia3-assembly1.cif.gz_A 12 186 6 236 0.5774 0.7628
4r6v-assembly1.cif.gz_A 9 185 9 251 0.577 0.7518
4ybk-assembly1.cif.gz_A 10 189 6 235 0.575 0.733
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q8SVD9-F1-model_v4 22 194 1 193 0.6923 0.8082
AF-O32057-F1-model_v4 11 194 1 208 0.6547 0.745
AF-Q54W07-F1-model_v4 9 194 29 250 0.648 0.7855
AF-Q58473-F1-model_v4 4 185 46 264 0.6379 0.8053
AF-Q326Z4-F1-model_v4 13 166 23 195 0.6167 0.7935
AF-O27476-F1-model_v4 1 194 269 533 0.4881 0.7282
AF-O45539-F1-model_v4 12 189 234 475 0.4756 0.754
AF-Q7TZN3-F1-model_v4 1 189 1 256 0.4711 0.7295
AF-Q54SC4-F1-model_v4 1 180 271 565 0.4691 0.7809
AF-P9WI64-F1-model_v4 1 189 7 267 0.4166 0.7413
Download Full SwissProt Results