dbCAN Logo

Cluster: Rep_1398_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1398_c_122 Rep_1398_c_122_26 24162 25103 + GT2
pfam Rep_1398_c_122 Rep_1398_c_122_27 25148 26680 + Glucos_trans_II
CAZyme Rep_1398_c_122 Rep_1398_c_122_28 26735 27730 + GT2
CAZyme Rep_1398_c_122 Rep_1398_c_122_29 27746 28627 + GT2
pfam Rep_1398_c_122 Rep_1398_c_122_30 28658 29986 + Wzy_C
TC Rep_1398_c_122 Rep_1398_c_122_31 30334 31002 + 9.B.18.1.2
CAZyme Rep_1398_c_122 Rep_1398_c_122_32 31028 31873 + GT2
Gene ID: Rep_1398_c_122_26
Type: CAZyme
Location: 24162 - 25103 (+)
Gene ID: Rep_1398_c_122_27
Type: pfam
Location: 25148 - 26680 (+)
Gene ID: Rep_1398_c_122_28
Type: CAZyme
Location: 26735 - 27730 (+)
Gene ID: Rep_1398_c_122_29
Type: CAZyme
Location: 27746 - 28627 (+)
Gene ID: Rep_1398_c_122_30
Type: pfam
Location: 28658 - 29986 (+)
Gene ID: Rep_1398_c_122_31
Type: TC
Location: 30334 - 31002 (+)
Gene ID: Rep_1398_c_122_32
Type: CAZyme
Location: 31028 - 31873 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List