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Cluster: Rep_1398_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1398_c_127 Rep_1398_c_127_17 20123 21061 - GH43_26
TF Rep_1398_c_127 Rep_1398_c_127_18 21097 22026 - HTH_5
CAZyme Rep_1398_c_127 Rep_1398_c_127_19 22167 23684 - GH51_1
TC Rep_1398_c_127 Rep_1398_c_127_20 23720 24613 - 3.A.1.1.34
TC Rep_1398_c_127 Rep_1398_c_127_21 24617 25507 - 3.A.1.1.34
TC Rep_1398_c_127 Rep_1398_c_127_22 25906 26976 - 3.A.1.1.34
CAZyme Rep_1398_c_127 Rep_1398_c_127_23 27249 29201 - GH127
TF Rep_1398_c_127 Rep_1398_c_127_24 29471 30499 - LacI
TC Rep_1398_c_127 Rep_1398_c_127_25 30683 31525 - 3.A.1.132.3
pfam Rep_1398_c_127 Rep_1398_c_127_26 31657 32094 - GGACT
peptidase Rep_1398_c_127 Rep_1398_c_127_27 32096 32737 - C15.001
TC Rep_1398_c_127 Rep_1398_c_127_28 32880 33809 - 9.B.211.1.2
Gene ID: Rep_1398_c_127_17
Type: CAZyme
Location: 20123 - 21061 (-)
Gene ID: Rep_1398_c_127_18
Type: TF
Location: 21097 - 22026 (-)
Gene ID: Rep_1398_c_127_19
Type: CAZyme
Location: 22167 - 23684 (-)
Gene ID: Rep_1398_c_127_20
Type: TC
Location: 23720 - 24613 (-)
Gene ID: Rep_1398_c_127_21
Type: TC
Location: 24617 - 25507 (-)
Gene ID: Rep_1398_c_127_22
Type: TC
Location: 25906 - 26976 (-)
Gene ID: Rep_1398_c_127_23
Type: CAZyme
Location: 27249 - 29201 (-)
Gene ID: Rep_1398_c_127_24
Type: TF
Location: 29471 - 30499 (-)
Gene ID: Rep_1398_c_127_25
Type: TC
Location: 30683 - 31525 (-)
Gene ID: Rep_1398_c_127_26
Type: pfam
Location: 31657 - 32094 (-)
Gene ID: Rep_1398_c_127_27
Type: peptidase
Location: 32096 - 32737 (-)
Gene ID: Rep_1398_c_127_28
Type: TC
Location: 32880 - 33809 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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