Cluster: Rep_1398_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1398
- CGC Family ID: CGCFAM_01215
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1398_c_6 | Rep_1398_c_6_6 | 2829 | 4196 | + | 2.A.66.1.7 |
| CAZyme | Rep_1398_c_6 | Rep_1398_c_6_7 | 4480 | 5199 | - | CE4 |
| TC | Rep_1398_c_6 | Rep_1398_c_6_8 | 5515 | 6810 | + | 2.A.40.1.4 |
| TC | Rep_1398_c_6 | Rep_1398_c_6_9 | 6974 | 8833 | + | 9.B.34.1.2 |
Gene ID: Rep_1398_c_6_6
Type: TC
Location: 2829 - 4196 (+)
Type: TC
Location: 2829 - 4196 (+)
Gene ID: Rep_1398_c_6_7
Type: CAZyme
Location: 4480 - 5199 (-)
Type: CAZyme
Location: 4480 - 5199 (-)
Gene ID: Rep_1398_c_6_8
Type: TC
Location: 5515 - 6810 (+)
Type: TC
Location: 5515 - 6810 (+)
Gene ID: Rep_1398_c_6_9
Type: TC
Location: 6974 - 8833 (+)
Type: TC
Location: 6974 - 8833 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900766315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.