Genome Details
Selected Rep_genome_ID: HRGMv2_4550
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp934869045
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR080257 | 3,081,546 | 92.62% | 0.06% | China | Asia | CGMR |
| HRGMv2_4550 | 3,191,219 | 98.65% | 0.732% | China | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4550_CGC31 | CGCFAM_00021 | Yes | 3 | 1 | |
| HRGMv2_4550_CGC40 | CGCFAM_00112 | Yes | 4 | 1 | |
| HRGMv2_4550_CGC3 | CGCFAM_00142 | Yes | 6 | 1 | |
| HRGMv2_4550_CGC38 | CGCFAM_00244 | Yes | 4 | 1 | |
| HRGMv2_4550_CGC16 | CGCFAM_00278 | Yes | 8 | 2 | |
| HRGMv2_4550_CGC27 | CGCFAM_00285 | Yes | 5 | 1 | |
| HRGMv2_4550_CGC25 | CGCFAM_00488 | Yes | 4 | 1 | |
| HRGMv2_4550_CGC39 | CGCFAM_00810 | Yes | 4 | 1 | |
| HRGMv2_4550_CGC7 | CGCFAM_00978 | Yes | 7 | 2 | |
| HRGMv2_4550_CGC24 | CGCFAM_01280 | Yes | 5 | 1 | |
| HRGMv2_4550_CGC37 | CGCFAM_01314 | Yes | 7 | 3 | |
| HRGMv2_4550_CGC28 | CGCFAM_01644 | Yes | 7 | 3 | |
| HRGMv2_4550_CGC10 | CGCFAM_01904 | Yes | 3 | 2 | |
| HRGMv2_4550_CGC4 | CGCFAM_02077 | Yes | 5 | 1 | |
| HRGMv2_4550_CGC17 | CGCFAM_02574 | Yes | 5 | 1 | |
| HRGMv2_4550_CGC22 | CGCFAM_02772 | Yes | 3 | 1 | |
| HRGMv2_4550_CGC2 | CGCFAM_03076 | Yes | 4 | 1 | |
| HRGMv2_4550_CGC34 | CGCFAM_05696 | Yes | 10 | 2 | |
| HRGMv2_4550_CGC29 | CGCFAM_05697 | Yes | 13 | 3 | |
| HRGMv2_4550_CGC35 | CGCFAM_09745 | Yes | 7 | 2 | |
| HRGMv2_4550_CGC12 | CGCFAM_10647 | Yes | 6 | 2 | |
| HRGMv2_4550_CGC21 | CGCFAM_10648 | Yes | 9 | 1 | |
| HRGMv2_4550_CGC9 | CGCFAM_10649 | Yes | 6 | 1 |
Top CAZyme Families