Cluster: HRGMv2_4550_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4550
- CGC Family ID: CGCFAM_00488
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4550_30 | HRGMv2_4550_30_17 | 15428 | 16135 | + | CE14 |
| TC | HRGMv2_4550_30 | HRGMv2_4550_30_18 | 16171 | 17778 | + | 3.A.1.1.10 |
| TC | HRGMv2_4550_30 | HRGMv2_4550_30_19 | 17875 | 18828 | + | 3.A.1.1.10 |
| TC | HRGMv2_4550_30 | HRGMv2_4550_30_20 | 18841 | 19725 | + | 3.A.1.1.10 |
Gene ID: HRGMv2_4550_30_17
Type: CAZyme
Location: 15428 - 16135 (+)
Type: CAZyme
Location: 15428 - 16135 (+)
Gene ID: HRGMv2_4550_30_18
Type: TC
Location: 16171 - 17778 (+)
Type: TC
Location: 16171 - 17778 (+)
Gene ID: HRGMv2_4550_30_19
Type: TC
Location: 17875 - 18828 (+)
Type: TC
Location: 17875 - 18828 (+)
Gene ID: HRGMv2_4550_30_20
Type: TC
Location: 18841 - 19725 (+)
Type: TC
Location: 18841 - 19725 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp934869045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.