Cluster: HRGMv2_4550_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4550
- CGC Family ID: CGCFAM_03076
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4550_2 | HRGMv2_4550_2_40 | 37271 | 39484 | - | GH95 |
| TF | HRGMv2_4550_2 | HRGMv2_4550_2_41 | 39799 | 40260 | + | MarR |
| TC | HRGMv2_4550_2 | HRGMv2_4550_2_42 | 40257 | 41972 | + | 3.A.1.135.7 |
| TC | HRGMv2_4550_2 | HRGMv2_4550_2_43 | 41965 | 43731 | + | 3.A.1.135.5 |
Gene ID: HRGMv2_4550_2_40
Type: CAZyme
Location: 37271 - 39484 (-)
Type: CAZyme
Location: 37271 - 39484 (-)
Gene ID: HRGMv2_4550_2_41
Type: TF
Location: 39799 - 40260 (+)
Type: TF
Location: 39799 - 40260 (+)
Gene ID: HRGMv2_4550_2_42
Type: TC
Location: 40257 - 41972 (+)
Type: TC
Location: 40257 - 41972 (+)
Gene ID: HRGMv2_4550_2_43
Type: TC
Location: 41965 - 43731 (+)
Type: TC
Location: 41965 - 43731 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp934869045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.