Cluster: HRGMv2_4550_CGC39
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4550
- CGC Family ID: CGCFAM_00810
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4550_63 | HRGMv2_4550_63_3 | 2006 | 3676 | - | GH123 |
| pfam | HRGMv2_4550_63 | HRGMv2_4550_63_4 | 4100 | 4594 | + | Acetyltransf_1 | FR47 | Acetyltransf_3 | Acetyltransf_7 | Acetyltransf_10 |
| NULL(UNKNOWN) | HRGMv2_4550_63 | HRGMv2_4550_63_5 | 4616 | 5311 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4550_63 | HRGMv2_4550_63_6 | 5534 | 7087 | - | 2.A.35.2.1 |
Gene ID: HRGMv2_4550_63_3
Type: CAZyme
Location: 2006 - 3676 (-)
Type: CAZyme
Location: 2006 - 3676 (-)
Gene ID: HRGMv2_4550_63_4
Type: pfam
Location: 4100 - 4594 (+)
Type: pfam
Location: 4100 - 4594 (+)
Gene ID: HRGMv2_4550_63_5
Type:
Location: 4616 - 5311 (+)
Type:
Location: 4616 - 5311 (+)
Gene ID: HRGMv2_4550_63_6
Type: TC
Location: 5534 - 7087 (-)
Type: TC
Location: 5534 - 7087 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp934869045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.