Cluster: HRGMv2_4550_CGC40
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4550
- CGC Family ID: CGCFAM_00112
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4550_66 | HRGMv2_4550_66_4 | 4275 | 5282 | - | CE19 |
| TC | HRGMv2_4550_66 | HRGMv2_4550_66_5 | 5310 | 6188 | - | 3.A.1.1.29 |
| TC | HRGMv2_4550_66 | HRGMv2_4550_66_6 | 6198 | 7121 | - | 3.A.1.1.10 |
| TC | HRGMv2_4550_66 | HRGMv2_4550_66_7 | 7149 | 8759 | - | 3.A.1.1.9 |
Gene ID: HRGMv2_4550_66_4
Type: CAZyme
Location: 4275 - 5282 (-)
Type: CAZyme
Location: 4275 - 5282 (-)
Gene ID: HRGMv2_4550_66_5
Type: TC
Location: 5310 - 6188 (-)
Type: TC
Location: 5310 - 6188 (-)
Gene ID: HRGMv2_4550_66_6
Type: TC
Location: 6198 - 7121 (-)
Type: TC
Location: 6198 - 7121 (-)
Gene ID: HRGMv2_4550_66_7
Type: TC
Location: 7149 - 8759 (-)
Type: TC
Location: 7149 - 8759 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp934869045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.