Cluster: HRGMv2_4550_CGC38
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4550
- CGC Family ID: CGCFAM_00244
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4550_62 | HRGMv2_4550_62_1 | 239 | 5188 | - | GH141 |
| pfam | HRGMv2_4550_62 | HRGMv2_4550_62_2 | 5326 | 6879 | - | DUF3502 |
| TC | HRGMv2_4550_62 | HRGMv2_4550_62_3 | 6928 | 7815 | - | 3.A.1.1.10 |
| TC | HRGMv2_4550_62 | HRGMv2_4550_62_4 | 7815 | 8780 | - | 3.A.1.1.10 |
Gene ID: HRGMv2_4550_62_1
Type: CAZyme
Location: 239 - 5188 (-)
Type: CAZyme
Location: 239 - 5188 (-)
Gene ID: HRGMv2_4550_62_2
Type: pfam
Location: 5326 - 6879 (-)
Type: pfam
Location: 5326 - 6879 (-)
Gene ID: HRGMv2_4550_62_3
Type: TC
Location: 6928 - 7815 (-)
Type: TC
Location: 6928 - 7815 (-)
Gene ID: HRGMv2_4550_62_4
Type: TC
Location: 7815 - 8780 (-)
Type: TC
Location: 7815 - 8780 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp934869045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.