Cluster: HRGMv2_4550_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4550
- CGC Family ID: CGCFAM_02574
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4550_18 | HRGMv2_4550_18_2 | 560 | 2737 | - | CBM67 | GH78 |
| TC | HRGMv2_4550_18 | HRGMv2_4550_18_3 | 2750 | 3625 | - | 3.A.1.1.9 |
| TC | HRGMv2_4550_18 | HRGMv2_4550_18_4 | 3645 | 4553 | - | 3.A.1.1.9 |
| TC | HRGMv2_4550_18 | HRGMv2_4550_18_5 | 4618 | 6294 | - | 3.A.1.1.9 |
| TC | HRGMv2_4550_18 | HRGMv2_4550_18_6 | 6640 | 8739 | - | 3.A.10.1.5 |
Gene ID: HRGMv2_4550_18_2
Type: CAZyme
Location: 560 - 2737 (-)
Type: CAZyme
Location: 560 - 2737 (-)
Gene ID: HRGMv2_4550_18_3
Type: TC
Location: 2750 - 3625 (-)
Type: TC
Location: 2750 - 3625 (-)
Gene ID: HRGMv2_4550_18_4
Type: TC
Location: 3645 - 4553 (-)
Type: TC
Location: 3645 - 4553 (-)
Gene ID: HRGMv2_4550_18_5
Type: TC
Location: 4618 - 6294 (-)
Type: TC
Location: 4618 - 6294 (-)
Gene ID: HRGMv2_4550_18_6
Type: TC
Location: 6640 - 8739 (-)
Type: TC
Location: 6640 - 8739 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp934869045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.