Cluster: HRGMv2_4550_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4550
- CGC Family ID: CGCFAM_01280
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4550_28 | HRGMv2_4550_28_26 | 36523 | 38277 | + | GH2 |
| TF | HRGMv2_4550_28 | HRGMv2_4550_28_27 | 38583 | 39647 | + | HTH_AraC |
| TC | HRGMv2_4550_28 | HRGMv2_4550_28_28 | 39644 | 41485 | + | 8.A.59.2.1 |
| TC | HRGMv2_4550_28 | HRGMv2_4550_28_29 | 41853 | 42779 | + | 3.A.1.1.10 |
| TC | HRGMv2_4550_28 | HRGMv2_4550_28_30 | 42798 | 43703 | + | 3.A.1.1.9 |
Gene ID: HRGMv2_4550_28_26
Type: CAZyme
Location: 36523 - 38277 (+)
Type: CAZyme
Location: 36523 - 38277 (+)
Gene ID: HRGMv2_4550_28_27
Type: TF
Location: 38583 - 39647 (+)
Type: TF
Location: 38583 - 39647 (+)
Gene ID: HRGMv2_4550_28_28
Type: TC
Location: 39644 - 41485 (+)
Type: TC
Location: 39644 - 41485 (+)
Gene ID: HRGMv2_4550_28_29
Type: TC
Location: 41853 - 42779 (+)
Type: TC
Location: 41853 - 42779 (+)
Gene ID: HRGMv2_4550_28_30
Type: TC
Location: 42798 - 43703 (+)
Type: TC
Location: 42798 - 43703 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp934869045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.