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Cluster: HRGMv2_4550_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4550_5 HRGMv2_4550_5_79 88380 89660 + GH125
pfam HRGMv2_4550_5 HRGMv2_4550_5_80 89924 90301 - DUF4363
pfam HRGMv2_4550_5 HRGMv2_4550_5_81 90298 90990 - DUF421
TC HRGMv2_4550_5 HRGMv2_4550_5_82 91136 92674 + 9.A.11.1.2
pfam HRGMv2_4550_5 HRGMv2_4550_5_83 92689 93801 + Spore_permease
pfam HRGMv2_4550_5 HRGMv2_4550_5_84 93788 94963 + Spore_GerAC
CAZyme HRGMv2_4550_5 HRGMv2_4550_5_85 95124 95957 + CE4
Gene ID: HRGMv2_4550_5_79
Type: CAZyme
Location: 88380 - 89660 (+)
Gene ID: HRGMv2_4550_5_80
Type: pfam
Location: 89924 - 90301 (-)
Gene ID: HRGMv2_4550_5_81
Type: pfam
Location: 90298 - 90990 (-)
Gene ID: HRGMv2_4550_5_82
Type: TC
Location: 91136 - 92674 (+)
Gene ID: HRGMv2_4550_5_83
Type: pfam
Location: 92689 - 93801 (+)
Gene ID: HRGMv2_4550_5_84
Type: pfam
Location: 93788 - 94963 (+)
Gene ID: HRGMv2_4550_5_85
Type: CAZyme
Location: 95124 - 95957 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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