Genome Details
Selected Rep_genome_ID: HRGMv2_3292
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E paracarnis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3292 | 5,676,784 | 97.31% | 0.341% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3292_CGC23 | CGCFAM_00076 | Yes | 7 | 2 | |
| HRGMv2_3292_CGC17 | CGCFAM_00144 | Yes | 12 | 3 | |
| HRGMv2_3292_CGC36 | CGCFAM_00293 | Yes | 7 | 1 | |
| HRGMv2_3292_CGC6 | CGCFAM_00294 | Yes | 16 | 2 | |
| HRGMv2_3292_CGC39 | CGCFAM_00359 | Yes | 8 | 1 | |
| HRGMv2_3292_CGC32 | CGCFAM_00529 | Yes | 10 | 3 | |
| HRGMv2_3292_CGC15 | CGCFAM_00558 | Yes | 4 | 1 | |
| HRGMv2_3292_CGC3 | CGCFAM_01364 | Yes | 11 | 1 | |
| HRGMv2_3292_CGC9 | CGCFAM_01485 | Yes | 8 | 2 | alginate |
| HRGMv2_3292_CGC27 | CGCFAM_03688 | Yes | 15 | 5 | |
| HRGMv2_3292_CGC31 | CGCFAM_03814 | Yes | 7 | 1 | |
| HRGMv2_3292_CGC34 | CGCFAM_03893 | Yes | 5 | 1 | |
| HRGMv2_3292_CGC14 | CGCFAM_05744 | Yes | 6 | 2 | |
| HRGMv2_3292_CGC4 | CGCFAM_05745 | Yes | 8 | 1 | |
| HRGMv2_3292_CGC10 | CGCFAM_06213 | Yes | 4 | 1 | |
| HRGMv2_3292_CGC19 | CGCFAM_06214 | Yes | 12 | 5 | |
| HRGMv2_3292_CGC20 | CGCFAM_07790 | Yes | 4 | 1 | |
| HRGMv2_3292_CGC1 | CGCFAM_10349 | Yes | 12 | 3 | |
| HRGMv2_3292_CGC28 | CGCFAM_10350 | Yes | 19 | 1 | |
| HRGMv2_3292_CGC30 | CGCFAM_10351 | Yes | 4 | 1 |
Top CAZyme Families