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Cluster: HRGMv2_3292_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3292_1 HRGMv2_3292_1_80 93339 94778 + 2.A.6.2.27
CAZyme HRGMv2_3292_1 HRGMv2_3292_1_81 94897 96174 - GT30
TF HRGMv2_3292_1 HRGMv2_3292_1_82 96198 97088 - HTH_1
TC HRGMv2_3292_1 HRGMv2_3292_1_83 97192 97527 + 2.A.7.1.11
pfam HRGMv2_3292_1 HRGMv2_3292_1_84 97583 98758 + FAD_binding_2 | DAO
TC HRGMv2_3292_1 HRGMv2_3292_1_85 98755 99567 + 8.A.5.1.4
NULL(UNKNOWN) HRGMv2_3292_1 HRGMv2_3292_1_86 99609 100568 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_3292_1 HRGMv2_3292_1_87 100596 102020 - PfkB
TC HRGMv2_3292_1 HRGMv2_3292_1_88 102250 104157 - 3.A.1.106.1
pfam HRGMv2_3292_1 HRGMv2_3292_1_89 104178 106055 + Wzy_C | Kdo
CAZyme HRGMv2_3292_1 HRGMv2_3292_1_90 106176 107057 - GT2
CAZyme HRGMv2_3292_1 HRGMv2_3292_1_91 107054 108202 - GT4
Gene ID: HRGMv2_3292_1_80
Type: TC
Location: 93339 - 94778 (+)
Gene ID: HRGMv2_3292_1_81
Type: CAZyme
Location: 94897 - 96174 (-)
Gene ID: HRGMv2_3292_1_82
Type: TF
Location: 96198 - 97088 (-)
Gene ID: HRGMv2_3292_1_83
Type: TC
Location: 97192 - 97527 (+)
Gene ID: HRGMv2_3292_1_84
Type: pfam
Location: 97583 - 98758 (+)
Gene ID: HRGMv2_3292_1_85
Type: TC
Location: 98755 - 99567 (+)
Gene ID: HRGMv2_3292_1_86
Type:
Location: 99609 - 100568 (+)
Gene ID: HRGMv2_3292_1_87
Type: STP
Location: 100596 - 102020 (-)
Gene ID: HRGMv2_3292_1_88
Type: TC
Location: 102250 - 104157 (-)
Gene ID: HRGMv2_3292_1_89
Type: pfam
Location: 104178 - 106055 (+)
Gene ID: HRGMv2_3292_1_90
Type: CAZyme
Location: 106176 - 107057 (-)
Gene ID: HRGMv2_3292_1_91
Type: CAZyme
Location: 107054 - 108202 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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