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Cluster: HRGMv2_3292_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3292_12 HRGMv2_3292_12_102 117565 118854 - GT4
pfam HRGMv2_3292_12 HRGMv2_3292_12_103 119014 119514 + AhpC-TSA | Redoxin
TC HRGMv2_3292_12 HRGMv2_3292_12_104 119746 121044 + 2.A.6.2.39
TC HRGMv2_3292_12 HRGMv2_3292_12_105 121041 124139 + 2.A.6.2.39
TC HRGMv2_3292_12 HRGMv2_3292_12_106 124136 127243 + 2.A.6.2.39
TC HRGMv2_3292_12 HRGMv2_3292_12_107 127240 128823 + 2.A.6.2.39
TC HRGMv2_3292_12 HRGMv2_3292_12_108 129175 131268 + 9.B.34.1.3
Gene ID: HRGMv2_3292_12_102
Type: CAZyme
Location: 117565 - 118854 (-)
Gene ID: HRGMv2_3292_12_103
Type: pfam
Location: 119014 - 119514 (+)
Gene ID: HRGMv2_3292_12_104
Type: TC
Location: 119746 - 121044 (+)
Gene ID: HRGMv2_3292_12_105
Type: TC
Location: 121041 - 124139 (+)
Gene ID: HRGMv2_3292_12_106
Type: TC
Location: 124136 - 127243 (+)
Gene ID: HRGMv2_3292_12_107
Type: TC
Location: 127240 - 128823 (+)
Gene ID: HRGMv2_3292_12_108
Type: TC
Location: 129175 - 131268 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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