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Cluster: HRGMv2_3292_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3292_1 HRGMv2_3292_1_376 433257 434885 - 1.A.13.2.3
pfam HRGMv2_3292_1 HRGMv2_3292_1_377 435087 435737 - GNA1162-like
pfam HRGMv2_3292_1 HRGMv2_3292_1_378 435734 436096 - DUF4810
TC HRGMv2_3292_1 HRGMv2_3292_1_379 436126 436806 - 1.B.48.1.5
NULL(UNKNOWN) HRGMv2_3292_1 HRGMv2_3292_1_380 437260 437952 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3292_1 HRGMv2_3292_1_381 438192 438464 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3292_1 HRGMv2_3292_1_382 441500 449656 - 1.C.75.1.3
TC HRGMv2_3292_1 HRGMv2_3292_1_383 449687 451408 - 1.B.20.1.3
pfam HRGMv2_3292_1 HRGMv2_3292_1_384 451864 452340 - PgaD
CAZyme HRGMv2_3292_1 HRGMv2_3292_1_385 452343 453683 - GT2
CAZyme HRGMv2_3292_1 HRGMv2_3292_1_386 453686 455683 - CE4 | GH153
TC HRGMv2_3292_1 HRGMv2_3292_1_387 455696 458176 - 1.B.55.1.1
pfam HRGMv2_3292_1 HRGMv2_3292_1_388 458513 460009 - DUF945
NULL(UNKNOWN) HRGMv2_3292_1 HRGMv2_3292_1_389 460262 460894 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3292_1 HRGMv2_3292_1_390 460976 462418 - 2.A.6.2.14
TC HRGMv2_3292_1 HRGMv2_3292_1_391 462415 463305 - 8.A.1.7.1
Gene ID: HRGMv2_3292_1_376
Type: TC
Location: 433257 - 434885 (-)
Gene ID: HRGMv2_3292_1_377
Type: pfam
Location: 435087 - 435737 (-)
Gene ID: HRGMv2_3292_1_378
Type: pfam
Location: 435734 - 436096 (-)
Gene ID: HRGMv2_3292_1_379
Type: TC
Location: 436126 - 436806 (-)
Gene ID: HRGMv2_3292_1_380
Type:
Location: 437260 - 437952 (-)
Gene ID: HRGMv2_3292_1_381
Type:
Location: 438192 - 438464 (+)
Gene ID: HRGMv2_3292_1_382
Type: TC
Location: 441500 - 449656 (-)
Gene ID: HRGMv2_3292_1_383
Type: TC
Location: 449687 - 451408 (-)
Gene ID: HRGMv2_3292_1_384
Type: pfam
Location: 451864 - 452340 (-)
Gene ID: HRGMv2_3292_1_385
Type: CAZyme
Location: 452343 - 453683 (-)
Gene ID: HRGMv2_3292_1_386
Type: CAZyme
Location: 453686 - 455683 (-)
Gene ID: HRGMv2_3292_1_387
Type: TC
Location: 455696 - 458176 (-)
Gene ID: HRGMv2_3292_1_388
Type: pfam
Location: 458513 - 460009 (-)
Gene ID: HRGMv2_3292_1_389
Type:
Location: 460262 - 460894 (-)
Gene ID: HRGMv2_3292_1_390
Type: TC
Location: 460976 - 462418 (-)
Gene ID: HRGMv2_3292_1_391
Type: TC
Location: 462415 - 463305 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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