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Cluster: HRGMv2_3292_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3292_4 HRGMv2_3292_4_114 137503 138972 + GT2
pfam HRGMv2_3292_4 HRGMv2_3292_4_115 139010 140176 + PilZ | HlyD_3
pfam HRGMv2_3292_4 HRGMv2_3292_4_116 140194 141726 + Sel1 | Sel1 | Sel1 | Sel1
TC HRGMv2_3292_4 HRGMv2_3292_4_117 141723 143213 + 1.B.13.1.1
pfam HRGMv2_3292_4 HRGMv2_3292_4_118 143228 144781 + NosD | NosD | Beta_helix
pfam HRGMv2_3292_4 HRGMv2_3292_4_119 144784 146241 + ALGX | CBM_26
CAZyme HRGMv2_3292_4 HRGMv2_3292_4_120 146250 147359 + PL5_1
TC HRGMv2_3292_4 HRGMv2_3292_4_121 147549 149081 + 2.A.50.2.1
Gene ID: HRGMv2_3292_4_114
Type: CAZyme
Location: 137503 - 138972 (+)
Gene ID: HRGMv2_3292_4_115
Type: pfam
Location: 139010 - 140176 (+)
Gene ID: HRGMv2_3292_4_116
Type: pfam
Location: 140194 - 141726 (+)
Gene ID: HRGMv2_3292_4_117
Type: TC
Location: 141723 - 143213 (+)
Gene ID: HRGMv2_3292_4_118
Type: pfam
Location: 143228 - 144781 (+)
Gene ID: HRGMv2_3292_4_119
Type: pfam
Location: 144784 - 146241 (+)
Gene ID: HRGMv2_3292_4_120
Type: CAZyme
Location: 146250 - 147359 (+)
Gene ID: HRGMv2_3292_4_121
Type: TC
Location: 147549 - 149081 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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