dbCAN Logo

Cluster: HRGMv2_3292_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3292_16 HRGMv2_3292_16_57 76179 77579 + GH23
TC HRGMv2_3292_16 HRGMv2_3292_16_58 77788 79617 + 3.A.1.5.21
TC HRGMv2_3292_16 HRGMv2_3292_16_59 79614 81446 + 3.A.1.5.24
TC HRGMv2_3292_16 HRGMv2_3292_16_60 81447 82520 + 3.A.1.5.24
TC HRGMv2_3292_16 HRGMv2_3292_16_61 82522 83541 + 3.A.1.5.21
TC HRGMv2_3292_16 HRGMv2_3292_16_62 83543 85144 + 3.A.1.5.21
TF HRGMv2_3292_16 HRGMv2_3292_16_63 85180 86073 + HTH_AraC | HTH_AraC
TC HRGMv2_3292_16 HRGMv2_3292_16_64 86015 86602 - 2.A.76.1.4
Gene ID: HRGMv2_3292_16_57
Type: CAZyme
Location: 76179 - 77579 (+)
Gene ID: HRGMv2_3292_16_58
Type: TC
Location: 77788 - 79617 (+)
Gene ID: HRGMv2_3292_16_59
Type: TC
Location: 79614 - 81446 (+)
Gene ID: HRGMv2_3292_16_60
Type: TC
Location: 81447 - 82520 (+)
Gene ID: HRGMv2_3292_16_61
Type: TC
Location: 82522 - 83541 (+)
Gene ID: HRGMv2_3292_16_62
Type: TC
Location: 83543 - 85144 (+)
Gene ID: HRGMv2_3292_16_63
Type: TF
Location: 85180 - 86073 (+)
Gene ID: HRGMv2_3292_16_64
Type: TC
Location: 86015 - 86602 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List